Query: 2dc3 .. [ 1 ] structure entries found and [ 2 ] structural binding motifs.
PDB idPDB titleSource OrganismDetermination MethodResol. Å / R-factor %
2DC3CRYSTAL STRUCTURE OF HUMAN CYTOGLOBIN AT 1.68 ANGSTROMS RESOLUTIONHomo sapiensX-ray diffraction 1.68 / 14.2
ChainMotif/LigandMotif_Seq
AHHHH..HFAYFQHRVAAHHVYFL
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Protoporphyrin IX Containing Fe
C34 H32 Fe N4 O4
Str-ElmRes NameRes NbrAtom Lig ChainLigandLigand NbrAtom Bond Distancs (Å)Bond type
37-53 H: 1F49CE2AHEM191CBC3.87van der Waals
37-53 H: 1F49CZAHEM191CBC4van der Waals
54-60 H: 5A56OAHEM191CBC3.66van der Waals
54-60 H: 5A56CBAHEM191CBC3.94van der Waals
54-60 H: 5Y59OAHEM191CMD3.38van der Waals
54-60 H: 5Y59CBAHEM191CMD3.67van der Waals
54-60 H: 5Y59CD2AHEM191CAC3.51van der Waals
54-60 H: 5Y59CD2AHEM191CBC3.68van der Waals
54-60 H: 5F60CE1AHEM191C1D3.97van der Waals
54-60 H: 5F60CE1AHEM191C2D3.7van der Waals
54-60 H: 5F60CE1AHEM191CMD3.75van der Waals
54-60 H: 5F60CE2AHEM191CHD3.79van der Waals
54-60 H: 5F60CZAHEM191CHD3.33van der Waals
54-60 H: 5F60CZAHEM191C4C3.86van der Waals
54-60 H: 5F60CZAHEM191C1D3.53van der Waals
54-60 H: 5F60CZAHEM191C2D3.69van der Waals
54-60 H: 5F60CZAHEM191CMD3.8van der Waals
75-95 H: 1Q77CGAHEM191O1D3.58van der Waals
75-95 H: 1Q77CDAHEM191O1D3.78van der Waals
75-95 H: 1Q77NE2AHEM191CGD3.72
75-95 H: 1Q77NE2AHEM191O1D3H.Bond
75-95 H: 1H81CD2AHEM191FE3.06Metalic Bond
75-95 H: 1H81CD2AHEM191CHA3.5van der Waals
75-95 H: 1H81CD2AHEM191NA3.17
75-95 H: 1H81CD2AHEM191C1A3.44van der Waals
75-95 H: 1H81CD2AHEM191ND3.21
75-95 H: 1H81CD2AHEM191C4D3.37van der Waals
75-95 H: 1H81CE1AHEM191FE3.03Metalic Bond
75-95 H: 1H81CE1AHEM191CHC3.82van der Waals
75-95 H: 1H81CE1AHEM191NB3.5
75-95 H: 1H81CE1AHEM191C4B3.86van der Waals
75-95 H: 1H81CE1AHEM191NC3.04
75-95 H: 1H81CE1AHEM191C1C3.5van der Waals
75-95 H: 1H81CE1AHEM191C4C3.65van der Waals
75-95 H: 1H81CE1AHEM191ND3.8
75-95 H: 1H81NE2AHEM191FE2.06Metalic Bond
75-95 H: 1H81NE2AHEM191CHA3.86
75-95 H: 1H81NE2AHEM191CHD3.91
75-95 H: 1H81NE2AHEM191NA2.92H.Bond
75-95 H: 1H81NE2AHEM191C1A3.65
75-95 H: 1H81NE2AHEM191C4A3.81
75-95 H: 1H81NE2AHEM191NB2.99H.Bond
75-95 H: 1H81NE2AHEM191C1B3.87
75-95 H: 1H81NE2AHEM191C4B3.8
75-95 H: 1H81NE2AHEM191NC2.9H.Bond
75-95 H: 1H81NE2AHEM191C1C3.73
75-95 H: 1H81NE2AHEM191C4C3.63
75-95 H: 1H81NE2AHEM191ND2.81H.Bond
75-95 H: 1H81NE2AHEM191C1D3.59
75-95 H: 1H81NE2AHEM191C4D3.5
75-95 H: 1R84OAHEM191CMA3.88van der Waals
75-95 H: 1R84CBAHEM191C3A3.83van der Waals
75-95 H: 1R84CBAHEM191CMA3.79van der Waals
75-95 H: 1R84NEAHEM191CMA3.86
75-95 H: 1R84CZAHEM191CAA3.61van der Waals
75-95 H: 1R84NH1AHEM191CAA3.62
75-95 H: 1R84NH2AHEM191CMA3.86
75-95 H: 1R84NH2AHEM191CAA3.78
75-95 H: 1R84NH2AHEM191CBA3.74
75-95 H: 1V85CG2AHEM191CHB3.99van der Waals
75-95 H: 1V85CG2AHEM191NB3.64
75-95 H: 1V85CG2AHEM191C1B3.53van der Waals
75-95 H: 1V85CG2AHEM191C2B3.75van der Waals
75-95 H: 1V85CG2AHEM191C3B3.96van der Waals
75-95 H: 1V85CG2AHEM191C4B3.89van der Waals
75-95 H: 1A88CBAHEM191CMB3.76van der Waals
98-116 H: 1A112CBAHEM191O1A3.76van der Waals
98-116 H: 1H113CD2AHEM191FE3.08Metalic Bond
98-116 H: 1H113CD2AHEM191CHD3.79van der Waals
98-116 H: 1H113CD2AHEM191NB3.85
98-116 H: 1H113CD2AHEM191NC3.06
98-116 H: 1H113CD2AHEM191C1C3.66van der Waals
98-116 H: 1H113CD2AHEM191C4C3.5van der Waals
98-116 H: 1H113CD2AHEM191ND3.48
98-116 H: 1H113CD2AHEM191C1D3.82van der Waals
98-116 H: 1H113CE1AHEM191FE3.03Metalic Bond
98-116 H: 1H113CE1AHEM191CHB3.6van der Waals
98-116 H: 1H113CE1AHEM191NA3.05
98-116 H: 1H113CE1AHEM191C1A3.74van der Waals
98-116 H: 1H113CE1AHEM191C4A3.38van der Waals
98-116 H: 1H113CE1AHEM191NB3.34
98-116 H: 1H113CE1AHEM191C1B3.6van der Waals
98-116 H: 1H113CE1AHEM191ND3.89
98-116 H: 1H113NE2AHEM191FE2.07Metalic Bond
98-116 H: 1H113NE2AHEM191CHB3.9
98-116 H: 1H113NE2AHEM191CHC3.93
98-116 H: 1H113NE2AHEM191CHD4
98-116 H: 1H113NE2AHEM191NA2.91H.Bond
98-116 H: 1H113NE2AHEM191C1A3.71
98-116 H: 1H113NE2AHEM191C4A3.65
98-116 H: 1H113NE2AHEM191NB2.85H.Bond
98-116 H: 1H113NE2AHEM191C1B3.61
98-116 H: 1H113NE2AHEM191C4B3.63
98-116 H: 1H113NE2AHEM191NC2.9H.Bond
98-116 H: 1H113NE2AHEM191C1C3.65
98-116 H: 1H113NE2AHEM191C4C3.72
98-116 H: 1H113NE2AHEM191ND2.91H.Bond
98-116 H: 1H113NE2AHEM191C1D3.73
98-116 H: 1H113NE2AHEM191C4D3.74
117 .H117CGAHEM191C2D3.81van der Waals
117 .H117CGAHEM191C3D3.83van der Waals
117 .H117ND1AHEM191C2D3.92
117 .H117ND1AHEM191C3D3.63
117 .H117ND1AHEM191CAD3.59
117 .H117CD2AHEM191O1A3.86van der Waals
117 .H117CD2AHEM191ND3.93
117 .H117CD2AHEM191C3D3.72van der Waals
117 .H117CD2AHEM191C4D3.75van der Waals
117 .H117CE1AHEM191CGA3.99van der Waals
117 .H117CE1AHEM191O1A3.83van der Waals
117 .H117CE1AHEM191O2A3.42van der Waals
117 .H117CE1AHEM191C3D3.39van der Waals
117 .H117CE1AHEM191C4D3.93van der Waals
117 .H117CE1AHEM191CAD3.21van der Waals
117 .H117NE2AHEM191CHA3.6
117 .H117NE2AHEM191CGA3.37
117 .H117NE2AHEM191O1A2.91H.Bond
117 .H117NE2AHEM191O2A3.21H.Bond
117 .H117NE2AHEM191C3D3.47
117 .H117NE2AHEM191C4D3.52
117 .H117NE2AHEM191CAD3.77
119 .V119CG1AHEM191C3C3.83van der Waals
119 .V119CG1AHEM191CAC3.54van der Waals
119 .V119CG2AHEM191CHD3.82van der Waals
119 .V119CG2AHEM191C3C3.9van der Waals
119 .V119CG2AHEM191C4C4van der Waals
119 .V119CG2AHEM191CAC3.69van der Waals
120-139 H: 1Y123CAHEM191CMC3.84van der Waals
120-139 H: 1Y123OAHEM191CMC3.7van der Waals
120-139 H: 1Y123CBAHEM191CMC3.89van der Waals
120-139 H: 1Y123CBAHEM191CBC3.87van der Waals
120-139 H: 1F124CD2AHEM191CAB3.91van der Waals
120-139 H: 1F124CE2AHEM191CHC3.67van der Waals
120-139 H: 1F124CE2AHEM191C3B3.78van der Waals
120-139 H: 1F124CE2AHEM191C4B3.84van der Waals
120-139 H: 1F124CE2AHEM191CAB3.56van der Waals
120-139 H: 1F124CZAHEM191CHC3.76van der Waals
120-139 H: 1L127CD2AHEM191CHC3.74van der Waals
120-139 H: 1L127CD2AHEM191CAB3.88van der Waals
120-139 H: 1L127CD2AHEM191CMC3.96van der Waals
BHHHH..HFAYFQHRVALAHHVYFL
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Protoporphyrin IX Containing Fe
C34 H32 Fe N4 O4
Str-ElmRes NameRes NbrAtom Lig ChainLigandLigand NbrAtom Bond Distancs (Å)Bond type
37-53 H: 1F49CE2BHEM191CBC3.85van der Waals
54-60 H: 5A56OBHEM191CBC3.64van der Waals
54-60 H: 5A56CBBHEM191CBC3.72van der Waals
54-60 H: 5Y59CBHEM191CMD3.87van der Waals
54-60 H: 5Y59OBHEM191CMD3.18van der Waals
54-60 H: 5Y59CBBHEM191CMD3.86van der Waals
54-60 H: 5Y59CD2BHEM191CAC3.6van der Waals
54-60 H: 5Y59CD2BHEM191CBC3.66van der Waals
54-60 H: 5F60CD1BHEM191CMD3.93van der Waals
54-60 H: 5F60CE1BHEM191C1D3.83van der Waals
54-60 H: 5F60CE1BHEM191C2D3.59van der Waals
54-60 H: 5F60CE1BHEM191CMD3.68van der Waals
54-60 H: 5F60CE2BHEM191CHD3.57van der Waals
54-60 H: 5F60CE2BHEM191CAC3.9van der Waals
54-60 H: 5F60CZBHEM191CHD3.2van der Waals
54-60 H: 5F60CZBHEM191C4C3.73van der Waals
54-60 H: 5F60CZBHEM191C1D3.41van der Waals
54-60 H: 5F60CZBHEM191C2D3.63van der Waals
54-60 H: 5F60CZBHEM191CMD3.79van der Waals
75-95 H: 1Q77CGBHEM191O1D3.56van der Waals
75-95 H: 1Q77CDBHEM191O1D3.94van der Waals
75-95 H: 1Q77NE2BHEM191CGD3.71
75-95 H: 1Q77NE2BHEM191O1D3.29H.Bond
75-95 H: 1H81CD2BHEM191FE3.01Metalic Bond
75-95 H: 1H81CD2BHEM191CHA3.48van der Waals
75-95 H: 1H81CD2BHEM191NA3.13
75-95 H: 1H81CD2BHEM191C1A3.42van der Waals
75-95 H: 1H81CD2BHEM191C4A3.98van der Waals
75-95 H: 1H81CD2BHEM191ND3.14
75-95 H: 1H81CD2BHEM191C1D3.95van der Waals
75-95 H: 1H81CD2BHEM191C4D3.37van der Waals
75-95 H: 1H81CE1BHEM191FE3.11Metalic Bond
75-95 H: 1H81CE1BHEM191CHC3.91van der Waals
75-95 H: 1H81CE1BHEM191NB3.54
75-95 H: 1H81CE1BHEM191C4B3.91van der Waals
75-95 H: 1H81CE1BHEM191NC3.11
75-95 H: 1H81CE1BHEM191C1C3.59van der Waals
75-95 H: 1H81CE1BHEM191C4C3.71van der Waals
75-95 H: 1H81CE1BHEM191ND3.87
75-95 H: 1H81NE2BHEM191FE2.09Metalic Bond
75-95 H: 1H81NE2BHEM191CHA3.94
75-95 H: 1H81NE2BHEM191CHD3.93
75-95 H: 1H81NE2BHEM191NA2.96H.Bond
75-95 H: 1H81NE2BHEM191C1A3.72
75-95 H: 1H81NE2BHEM191C4A3.81
75-95 H: 1H81NE2BHEM191NB2.96H.Bond
75-95 H: 1H81NE2BHEM191C1B3.83
75-95 H: 1H81NE2BHEM191C4B3.76
75-95 H: 1H81NE2BHEM191NC2.85H.Bond
75-95 H: 1H81NE2BHEM191C1C3.7
75-95 H: 1H81NE2BHEM191C4C3.61
75-95 H: 1H81NE2BHEM191ND2.86H.Bond
75-95 H: 1H81NE2BHEM191C1D3.61
75-95 H: 1H81NE2BHEM191C4D3.61
75-95 H: 1R84CBBHEM191C3A3.88van der Waals
75-95 H: 1R84CBBHEM191CMA3.77van der Waals
75-95 H: 1R84NEBHEM191CMA3.83
75-95 H: 1R84CZBHEM191CAA3.7van der Waals
75-95 H: 1R84NH1BHEM191CAA3.74
75-95 H: 1R84NH2BHEM191CMA3.81
75-95 H: 1R84NH2BHEM191CAA3.8
75-95 H: 1R84NH2BHEM191CBA3.79
75-95 H: 1V85CG2BHEM191NB3.68
75-95 H: 1V85CG2BHEM191C1B3.6van der Waals
75-95 H: 1V85CG2BHEM191C2B3.75van der Waals
75-95 H: 1V85CG2BHEM191C3B3.91van der Waals
75-95 H: 1V85CG2BHEM191C4B3.89van der Waals
75-95 H: 1A88CBBHEM191CMB3.82van der Waals
75-95 H: 1L89CD1BHEM191CBB3.76van der Waals
98-116 H: 1A112CBBHEM191O2A3.73van der Waals
98-116 H: 1H113CD2BHEM191FE3.09Metalic Bond
98-116 H: 1H113CD2BHEM191CHD3.74van der Waals
98-116 H: 1H113CD2BHEM191NB3.87
98-116 H: 1H113CD2BHEM191NC3.03
98-116 H: 1H113CD2BHEM191C1C3.62van der Waals
98-116 H: 1H113CD2BHEM191C4C3.46van der Waals
98-116 H: 1H113CD2BHEM191ND3.45
98-116 H: 1H113CD2BHEM191C1D3.74van der Waals
98-116 H: 1H113CE1BHEM191FE3.01Metalic Bond
98-116 H: 1H113CE1BHEM191CHB3.66van der Waals
98-116 H: 1H113CE1BHEM191NA3.04
98-116 H: 1H113CE1BHEM191C1A3.7van der Waals
98-116 H: 1H113CE1BHEM191C4A3.41van der Waals
98-116 H: 1H113CE1BHEM191NB3.37
98-116 H: 1H113CE1BHEM191C1B3.64van der Waals
98-116 H: 1H113CE1BHEM191ND3.81
98-116 H: 1H113NE2BHEM191FE2.06Metalic Bond
98-116 H: 1H113NE2BHEM191CHA4
98-116 H: 1H113NE2BHEM191CHB3.95
98-116 H: 1H113NE2BHEM191CHC3.94
98-116 H: 1H113NE2BHEM191CHD3.94
98-116 H: 1H113NE2BHEM191NA2.92H.Bond
98-116 H: 1H113NE2BHEM191C1A3.69
98-116 H: 1H113NE2BHEM191C4A3.68
98-116 H: 1H113NE2BHEM191NB2.89H.Bond
98-116 H: 1H113NE2BHEM191C1B3.64
98-116 H: 1H113NE2BHEM191C4B3.66
98-116 H: 1H113NE2BHEM191NC2.85H.Bond
98-116 H: 1H113NE2BHEM191C1C3.62
98-116 H: 1H113NE2BHEM191C4C3.66
98-116 H: 1H113NE2BHEM191ND2.83H.Bond
98-116 H: 1H113NE2BHEM191C1D3.62
98-116 H: 1H113NE2BHEM191C4D3.67
117 .H117CGBHEM191C2D3.74van der Waals
117 .H117CGBHEM191C3D3.76van der Waals
117 .H117ND1BHEM191C2D3.97
117 .H117ND1BHEM191C3D3.66
117 .H117ND1BHEM191CAD3.56
117 .H117CD2BHEM191O2A3.78van der Waals
117 .H117CD2BHEM191ND3.88
117 .H117CD2BHEM191C2D3.91van der Waals
117 .H117CD2BHEM191C3D3.63van der Waals
117 .H117CD2BHEM191C4D3.62van der Waals
117 .H117CE1BHEM191CGA3.95van der Waals
117 .H117CE1BHEM191O1A3.37van der Waals
117 .H117CE1BHEM191O2A3.76van der Waals
117 .H117CE1BHEM191C3D3.51van der Waals
117 .H117CE1BHEM191CAD3.22van der Waals
117 .H117NE2BHEM191CHA3.59
117 .H117NE2BHEM191CGA3.32
117 .H117NE2BHEM191O1A3.17H.Bond
117 .H117NE2BHEM191O2A2.82H.Bond
117 .H117NE2BHEM191C3D3.51
117 .H117NE2BHEM191C4D3.53
117 .H117NE2BHEM191CAD3.69
119 .V119CG1BHEM191C3C4van der Waals
119 .V119CG1BHEM191CAC3.63van der Waals
119 .V119CG2BHEM191CHD3.91van der Waals
119 .V119CG2BHEM191CAC3.69van der Waals
121-139 H: 1Y123OBHEM191CMC3.83van der Waals
121-139 H: 1Y123CBBHEM191CMC3.87van der Waals
121-139 H: 1F124CD2BHEM191CAB3.7van der Waals
121-139 H: 1F124CE2BHEM191CHC3.69van der Waals
121-139 H: 1F124CE2BHEM191C3B3.73van der Waals
121-139 H: 1F124CE2BHEM191C4B3.79van der Waals
121-139 H: 1F124CE2BHEM191CAB3.59van der Waals
121-139 H: 1F124CZBHEM191CHC3.92van der Waals
121-139 H: 1L127CD2BHEM191CHC3.67van der Waals
121-139 H: 1L127CD2BHEM191CAB3.91van der Waals
121-139 H: 1L127CD2BHEM191CMC3.88van der Waals