Query: Corynebacterium diphtheriae .. [ 1 ] structure entries found and [ 3 ] structural binding motifs.
PDB idPDB titleSource OrganismDetermination MethodResol. Å / R-factor %
1IW0Crystal structure of a heme oxygenase (HmuO) from Corynebacterium diphtheriae complexed with heme in the ferric stateCorynebacterium diphtheriaeX-ray diffraction 1.4 / 16.8
ChainMotif/LigandMotif_Seq
AHHHHHKHAMLYVLGSGVRFNF
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Protoporphyrin IX Containing Fe
C34 H32 Fe N4 O4
Str-ElmRes NameRes NbrAtom Lig ChainLigandLigand NbrAtom Bond Distancs (Å)Bond type
7-25 H: 1K13CBAHEM901O2A3.51van der Waals
7-25 H: 1K13CGAHEM901CGA3.85van der Waals
7-25 H: 1K13CGAHEM901O2A3.58van der Waals
7-25 H: 1K13CDAHEM901CGA3.66van der Waals
7-25 H: 1K13CDAHEM901O1A3.74van der Waals
7-25 H: 1K13CDAHEM901O2A3.64van der Waals
7-25 H: 1K13CEAHEM901CGA3.93van der Waals
7-25 H: 1K13CEAHEM901O1A3.81van der Waals
7-25 H: 1K13CEAHEM901CGD3.93van der Waals
7-25 H: 1K13CEAHEM901O1D3.12van der Waals
7-25 H: 1H20CD2AHEM901CHB3.61van der Waals
7-25 H: 1H20CD2AHEM901C1A3.85van der Waals
7-25 H: 1H20CD2AHEM901C4A3.42van der Waals
7-25 H: 1H20CD2AHEM901C1B3.53van der Waals
7-25 H: 1H20CD2AHEM901C4B3.91van der Waals
7-25 H: 1H20CD2AHEM901NA3.13
7-25 H: 1H20CD2AHEM901NB3.18
7-25 H: 1H20CD2AHEM901FE3.04Metalic Bond
7-25 H: 1H20CE1AHEM901CHD3.86van der Waals
7-25 H: 1H20CE1AHEM901C1C3.65van der Waals
7-25 H: 1H20CE1AHEM901C4C3.53van der Waals
7-25 H: 1H20CE1AHEM901C1D3.76van der Waals
7-25 H: 1H20CE1AHEM901NB3.84
7-25 H: 1H20CE1AHEM901NC3.1
7-25 H: 1H20CE1AHEM901ND3.38
7-25 H: 1H20CE1AHEM901FE2.94Metalic Bond
7-25 H: 1H20NE2AHEM901CHB3.93
7-25 H: 1H20NE2AHEM901CHC3.88
7-25 H: 1H20NE2AHEM901C1A3.61
7-25 H: 1H20NE2AHEM901C4A3.61
7-25 H: 1H20NE2AHEM901C1B3.65
7-25 H: 1H20NE2AHEM901C4B3.51
7-25 H: 1H20NE2AHEM901C1C3.58
7-25 H: 1H20NE2AHEM901C4C3.76
7-25 H: 1H20NE2AHEM901C1D3.78
7-25 H: 1H20NE2AHEM901C4D3.66
7-25 H: 1H20NE2AHEM901NA2.82H.Bond
7-25 H: 1H20NE2AHEM901NB2.82H.Bond
7-25 H: 1H20NE2AHEM901NC2.93H.Bond
7-25 H: 1H20NE2AHEM901ND2.94H.Bond
7-25 H: 1H20NE2AHEM901FE2Metalic Bond
7-25 H: 1A23CBAHEM901CAB3.96van der Waals
7-25 H: 1A23CBAHEM901CBB3.47van der Waals
26-34 H: 1M29CGAHEM901CMC3.79van der Waals
26-34 H: 1L33CD1AHEM901CMC3.8van der Waals
26-34 H: 1L33CD1AHEM901CAC3.54van der Waals
26-34 H: 1L33CD1AHEM901CBC3.63van der Waals
121-152 H: 1Y130OAHEM901CMA3.57van der Waals
121-152 H: 1Y130CE1AHEM901O2A3.33van der Waals
121-152 H: 1Y130CE2AHEM901CMA3.91van der Waals
121-152 H: 1Y130CZAHEM901CMA3.86van der Waals
121-152 H: 1Y130CZAHEM901O2A3.45van der Waals
121-152 H: 1Y130OHAHEM901CBA3.58van der Waals
121-152 H: 1Y130OHAHEM901CGA3.51van der Waals
121-152 H: 1Y130OHAHEM901O2A2.66H.Bond
121-152 H: 1V131CAAHEM901CMA3.95van der Waals
121-152 H: 1V131OAHEM901CHB3.42van der Waals
121-152 H: 1V131OAHEM901CMA3.57van der Waals
121-152 H: 1V131OAHEM901CMB3.6van der Waals
121-152 H: 1V131CG1AHEM901CMB3.56van der Waals
121-152 H: 1L134CGAHEM901CAA3.94van der Waals
121-152 H: 1L134CD2AHEM901O2A4van der Waals
121-152 H: 1G135NAHEM901C2A3.9
121-152 H: 1G135NAHEM901C3A3.6
121-152 H: 1G135NAHEM901CMA3.71
121-152 H: 1G135CAAHEM901CHB3.76van der Waals
121-152 H: 1G135CAAHEM901C1A3.59van der Waals
121-152 H: 1G135CAAHEM901C2A3.59van der Waals
121-152 H: 1G135CAAHEM901C3A3.31van der Waals
121-152 H: 1G135CAAHEM901C4A3.25van der Waals
121-152 H: 1G135CAAHEM901CMA3.92van der Waals
121-152 H: 1G135CAAHEM901NA3.47
121-152 H: 1S138CBAHEM901CHA3.78van der Waals
121-152 H: 1G139NAHEM901C4D3.99
121-152 H: 1G139CAAHEM901C1D3.67van der Waals
121-152 H: 1G139CAAHEM901C2D3.68van der Waals
121-152 H: 1G139CAAHEM901C3D3.94van der Waals
121-152 H: 1G139CAAHEM901ND3.89
121-152 H: 1V142CG1AHEM901CBC3.55van der Waals
168-183 H: 1R177NEAHEM901O1A3.64H.Bond
168-183 H: 1R177CZAHEM901O1A3.6van der Waals
168-183 H: 1R177NH2AHEM901CGA3.78
168-183 H: 1R177NH2AHEM901O1A2.7H.Bond
186-213 H: 1F201CD2AHEM901CMB3.97van der Waals
186-213 H: 1F201CE2AHEM901CHB3.9van der Waals
186-213 H: 1F201CE2AHEM901C1B3.84van der Waals
186-213 H: 1F201CE2AHEM901C2B3.67van der Waals
186-213 H: 1F201CE2AHEM901CMB3.55van der Waals
186-213 H: 1F201CZAHEM901CHB3.56van der Waals
186-213 H: 1F201CZAHEM901C1B3.97van der Waals
186-213 H: 1F201CZAHEM901CMB3.94van der Waals
186-213 H: 1N204CBAHEM901CBB3.58van der Waals
186-213 H: 1F208CE2AHEM901CAB3.56van der Waals
186-213 H: 1F208CE2AHEM901CBB3.49van der Waals
186-213 H: 1F208CZAHEM901CAB3.57van der Waals
186-213 H: 1F208CZAHEM901CBB3.84van der Waals
BHHHHHHKHAEMLYVLGSGIMRFNF
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Protoporphyrin IX Containing Fe
C34 H32 Fe N4 O4
Str-ElmRes NameRes NbrAtom Lig ChainLigandLigand NbrAtom Bond Distancs (Å)Bond type
307-325 H: 1K313CABHEM902O2A3.93van der Waals
307-325 H: 1K313CBBHEM902O2A3.36van der Waals
307-325 H: 1K313CGBHEM902CGA3.65van der Waals
307-325 H: 1K313CGBHEM902O2A3.51van der Waals
307-325 H: 1K313CDBHEM902CGA3.69van der Waals
307-325 H: 1K313CDBHEM902O1A3.68van der Waals
307-325 H: 1K313CDBHEM902O2A3.8van der Waals
307-325 H: 1K313CEBHEM902CGA3.71van der Waals
307-325 H: 1K313CEBHEM902O1A3.49van der Waals
307-325 H: 1K313CEBHEM902O2D3.37van der Waals
307-325 H: 1K313NZBHEM902O2D3.44H.Bond
307-325 H: 1H320CD2BHEM902CHB3.59van der Waals
307-325 H: 1H320CD2BHEM902C1A3.82van der Waals
307-325 H: 1H320CD2BHEM902C4A3.4van der Waals
307-325 H: 1H320CD2BHEM902C1B3.49van der Waals
307-325 H: 1H320CD2BHEM902C4B3.84van der Waals
307-325 H: 1H320CD2BHEM902NA3.08
307-325 H: 1H320CD2BHEM902NB3.14
307-325 H: 1H320CD2BHEM902FE2.99Metalic Bond
307-325 H: 1H320CE1BHEM902CHD3.84van der Waals
307-325 H: 1H320CE1BHEM902C1C3.89van der Waals
307-325 H: 1H320CE1BHEM902C4C3.67van der Waals
307-325 H: 1H320CE1BHEM902C1D3.75van der Waals
307-325 H: 1H320CE1BHEM902NB3.95
307-325 H: 1H320CE1BHEM902NC3.25
307-325 H: 1H320CE1BHEM902ND3.35
307-325 H: 1H320CE1BHEM902FE3Metalic Bond
307-325 H: 1H320NE2BHEM902CHA3.91
307-325 H: 1H320NE2BHEM902CHB3.96
307-325 H: 1H320NE2BHEM902CHC3.96
307-325 H: 1H320NE2BHEM902C1A3.58
307-325 H: 1H320NE2BHEM902C4A3.64
307-325 H: 1H320NE2BHEM902C1B3.68
307-325 H: 1H320NE2BHEM902C4B3.54
307-325 H: 1H320NE2BHEM902C1C3.68
307-325 H: 1H320NE2BHEM902C4C3.8
307-325 H: 1H320NE2BHEM902C1D3.77
307-325 H: 1H320NE2BHEM902C4D3.6
307-325 H: 1H320NE2BHEM902NA2.81H.Bond
307-325 H: 1H320NE2BHEM902NB2.84H.Bond
307-325 H: 1H320NE2BHEM902NC3H.Bond
307-325 H: 1H320NE2BHEM902ND2.93H.Bond
307-325 H: 1H320NE2BHEM902FE2.01Metalic Bond
307-325 H: 1A323CBBHEM902CBB3.43van der Waals
307-325 H: 1E324CABHEM902CMC3.77van der Waals
307-325 H: 1E324CBBHEM902C2C3.95van der Waals
307-325 H: 1E324CBBHEM902CMC3.9van der Waals
307-325 H: 1E324CGBHEM902C2C3.77van der Waals
307-325 H: 1E324CGBHEM902C3C3.7van der Waals
307-325 H: 1E324CGBHEM902CMC3.7van der Waals
307-325 H: 1E324CGBHEM902CAC3.58van der Waals
307-325 H: 1E324CDBHEM902C3C3.71van der Waals
307-325 H: 1E324CDBHEM902CAC3.46van der Waals
307-325 H: 1E324OE1BHEM902C3C3.88van der Waals
307-325 H: 1E324OE1BHEM902C4C3.96van der Waals
307-325 H: 1E324OE2BHEM902CAC3.46van der Waals
326-334 H: 1M329CGBHEM902CMC3.56van der Waals
326-334 H: 1L333CD1BHEM902CMC3.72van der Waals
326-334 H: 1L333CD1BHEM902CAC3.67van der Waals
421-439 H: 1Y430OBHEM902CMA3.51van der Waals
421-439 H: 1Y430CE1BHEM902O2A3.35van der Waals
421-439 H: 1Y430CE2BHEM902CMA3.79van der Waals
421-439 H: 1Y430CZBHEM902CMA3.8van der Waals
421-439 H: 1Y430CZBHEM902O2A3.41van der Waals
421-439 H: 1Y430OHBHEM902CMA3.99van der Waals
421-439 H: 1Y430OHBHEM902CBA3.49van der Waals
421-439 H: 1Y430OHBHEM902CGA3.46van der Waals
421-439 H: 1Y430OHBHEM902O2A2.61H.Bond
421-439 H: 1V431CABHEM902CMA3.93van der Waals
421-439 H: 1V431OBHEM902CHB3.45van der Waals
421-439 H: 1V431OBHEM902CMA3.57van der Waals
421-439 H: 1V431OBHEM902CMB3.57van der Waals
421-439 H: 1V431CG1BHEM902CMB3.55van der Waals
421-439 H: 1L434CD2BHEM902O2A3.86van der Waals
421-439 H: 1G435NBHEM902C2A3.88
421-439 H: 1G435NBHEM902C3A3.54
421-439 H: 1G435NBHEM902C4A3.96
421-439 H: 1G435NBHEM902CMA3.64
421-439 H: 1G435CABHEM902CHB3.7van der Waals
421-439 H: 1G435CABHEM902C1A3.71van der Waals
421-439 H: 1G435CABHEM902C2A3.65van der Waals
421-439 H: 1G435CABHEM902C3A3.32van der Waals
421-439 H: 1G435CABHEM902C4A3.24van der Waals
421-439 H: 1G435CABHEM902CMA3.92van der Waals
421-439 H: 1G435CABHEM902NA3.52
421-439 H: 1S438CBBHEM902CHA3.74van der Waals
421-439 H: 1S438CBBHEM902CHA3.65van der Waals
421-439 H: 1S438CBBHEM902C3D3.8van der Waals
421-439 H: 1S438CBBHEM902C4D3.86van der Waals
421-439 H: 1S438CBBHEM902CAD3.64van der Waals
421-439 H: 1S438OGBHEM902CHA3.89van der Waals
421-439 H: 1S438OGBHEM902CAA4van der Waals
439-452 H: 1G439NBHEM902C1D3.92
439-452 H: 1G439NBHEM902C2D3.85
439-452 H: 1G439NBHEM902C3D3.76
439-452 H: 1G439NBHEM902C4D3.71
439-452 H: 1G439NBHEM902ND3.8H.Bond
439-452 H: 1G439CABHEM902CHD3.75van der Waals
439-452 H: 1G439CABHEM902C1D3.43van der Waals
439-452 H: 1G439CABHEM902C2D3.6van der Waals
439-452 H: 1G439CABHEM902C3D3.99van der Waals
439-452 H: 1G439CABHEM902ND3.69
439-452 H: 1G439CABHEM902CHD3.7van der Waals
439-452 H: 1G439CABHEM902C1D3.4van der Waals
439-452 H: 1G439CABHEM902C2D3.57van der Waals
439-452 H: 1G439CABHEM902C3D3.99van der Waals
439-452 H: 1G439CABHEM902ND3.68
439-452 H: 1I443CG1BHEM902CBC3.74van der Waals
439-452 H: 1I443CD1BHEM902C2C3.9van der Waals
439-452 H: 1M446CEBHEM902CBC3.72van der Waals
468-483 H: 1R477NEBHEM902O1A3.75H.Bond
468-483 H: 1R477CZBHEM902O1A3.64van der Waals
468-483 H: 1R477NH2BHEM902CGA3.8
468-483 H: 1R477NH2BHEM902O1A2.68H.Bond
486-513 H: 1F501CD2BHEM902CMB3.93van der Waals
486-513 H: 1F501CE2BHEM902CHB3.95van der Waals
486-513 H: 1F501CE2BHEM902C1B3.9van der Waals
486-513 H: 1F501CE2BHEM902C2B3.67van der Waals
486-513 H: 1F501CE2BHEM902CMB3.47van der Waals
486-513 H: 1F501CZBHEM902CHB3.69van der Waals
486-513 H: 1F501CZBHEM902CMB3.87van der Waals
486-513 H: 1N504CBBHEM902CBB3.56van der Waals
486-513 H: 1F508CE2BHEM902CAB3.64van der Waals
486-513 H: 1F508CE2BHEM902CBB3.4van der Waals
486-513 H: 1F508CZBHEM902CAB3.64van der Waals
486-513 H: 1F508CZBHEM902CBB3.66van der Waals
CHHHHHKHAEMLYVLGSGVRFNF
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Protoporphyrin IX Containing Fe
C34 H32 Fe N4 O4
Str-ElmRes NameRes NbrAtom Lig ChainLigandLigand NbrAtom Bond Distancs (Å)Bond type
607-625 H: 1K613CBCHEM903O2A3.48van der Waals
607-625 H: 1K613CGCHEM903CGA3.81van der Waals
607-625 H: 1K613CGCHEM903O2A3.54van der Waals
607-625 H: 1K613CDCHEM903CGA3.66van der Waals
607-625 H: 1K613CDCHEM903O1A3.76van der Waals
607-625 H: 1K613CDCHEM903O2A3.65van der Waals
607-625 H: 1K613CECHEM903CGA3.93van der Waals
607-625 H: 1K613CECHEM903O1A3.86van der Waals
607-625 H: 1K613CECHEM903O2D3.41van der Waals
607-625 H: 1K613NZCHEM903CGD3.65
607-625 H: 1K613NZCHEM903O1D3.65H.Bond
607-625 H: 1K613NZCHEM903O2D2.89H.Bond
607-625 H: 1H620CD2CHEM903CHB3.56van der Waals
607-625 H: 1H620CD2CHEM903C1A3.74van der Waals
607-625 H: 1H620CD2CHEM903C4A3.39van der Waals
607-625 H: 1H620CD2CHEM903C1B3.45van der Waals
607-625 H: 1H620CD2CHEM903C4B3.88van der Waals
607-625 H: 1H620CD2CHEM903NA3.02
607-625 H: 1H620CD2CHEM903NB3.11
607-625 H: 1H620CD2CHEM903FE2.95Metalic Bond
607-625 H: 1H620CE1CHEM903CHD3.91van der Waals
607-625 H: 1H620CE1CHEM903C4C3.88van der Waals
607-625 H: 1H620CE1CHEM903C1D3.6van der Waals
607-625 H: 1H620CE1CHEM903C4D3.76van der Waals
607-625 H: 1H620CE1CHEM903NA3.89
607-625 H: 1H620CE1CHEM903NC3.41
607-625 H: 1H620CE1CHEM903ND3.14
607-625 H: 1H620CE1CHEM903FE2.98Metalic Bond
607-625 H: 1H620NE2CHEM903CHA3.76
607-625 H: 1H620NE2CHEM903CHB3.97
607-625 H: 1H620NE2CHEM903C1A3.43
607-625 H: 1H620NE2CHEM903C4A3.62
607-625 H: 1H620NE2CHEM903C1B3.71
607-625 H: 1H620NE2CHEM903C4B3.68
607-625 H: 1H620NE2CHEM903C1C3.75
607-625 H: 1H620NE2CHEM903C4C3.9
607-625 H: 1H620NE2CHEM903C1D3.69
607-625 H: 1H620NE2CHEM903C4D3.49
607-625 H: 1H620NE2CHEM903NA2.74H.Bond
607-625 H: 1H620NE2CHEM903NB2.89H.Bond
607-625 H: 1H620NE2CHEM903NC3.02H.Bond
607-625 H: 1H620NE2CHEM903ND2.83H.Bond
607-625 H: 1H620NE2CHEM903FE1.98Metalic Bond, Covalent
607-625 H: 1A623CBCHEM903CAB3.81van der Waals
607-625 H: 1A623CBCHEM903CBB3.63van der Waals
607-625 H: 1E624CGCHEM903C2C3.96van der Waals
607-625 H: 1E624CGCHEM903C3C3.86van der Waals
607-625 H: 1E624OE1CHEM903CHD3.63van der Waals
607-625 H: 1E624OE1CHEM903C4C3.86van der Waals
626-635 H: 1M629CECHEM903CMC4van der Waals
626-635 H: 1L633CD1CHEM903CAC3.8van der Waals
721-752 H: 1Y730OCHEM903CMA3.47van der Waals
721-752 H: 1Y730CE1CHEM903O2A3.36van der Waals
721-752 H: 1Y730CE2CHEM903CMA3.81van der Waals
721-752 H: 1Y730CZCHEM903CMA3.8van der Waals
721-752 H: 1Y730CZCHEM903O2A3.44van der Waals
721-752 H: 1Y730OHCHEM903CBA3.55van der Waals
721-752 H: 1Y730OHCHEM903CGA3.53van der Waals
721-752 H: 1Y730OHCHEM903O2A2.67H.Bond
721-752 H: 1V731CACHEM903CMA3.88van der Waals
721-752 H: 1V731OCHEM903CHB3.43van der Waals
721-752 H: 1V731OCHEM903CMA3.58van der Waals
721-752 H: 1V731OCHEM903CMB3.58van der Waals
721-752 H: 1V731CG1CHEM903CMB3.54van der Waals
721-752 H: 1L734CGCHEM903CAA3.95van der Waals
721-752 H: 1L734CD2CHEM903CGA3.89van der Waals
721-752 H: 1L734CD2CHEM903O1A3.95van der Waals
721-752 H: 1L734CD2CHEM903O2A3.81van der Waals
721-752 H: 1G735NCHEM903C2A3.83
721-752 H: 1G735NCHEM903C3A3.51
721-752 H: 1G735NCHEM903C4A3.87
721-752 H: 1G735NCHEM903CMA3.74
721-752 H: 1G735CACHEM903CHB3.75van der Waals
721-752 H: 1G735CACHEM903C1A3.54van der Waals
721-752 H: 1G735CACHEM903C2A3.6van der Waals
721-752 H: 1G735CACHEM903C3A3.37van der Waals
721-752 H: 1G735CACHEM903C4A3.22van der Waals
721-752 H: 1G735CACHEM903NA3.38
721-752 H: 1S738CBCHEM903CHA3.53van der Waals
721-752 H: 1S738CBCHEM903C3D3.85van der Waals
721-752 H: 1S738CBCHEM903C4D3.83van der Waals
721-752 H: 1S738CBCHEM903CAD3.71van der Waals
721-752 H: 1G739CACHEM903C1D3.8van der Waals
721-752 H: 1G739CACHEM903C2D3.94van der Waals
721-752 H: 1V742CBCHEM903CBC3.94van der Waals
721-752 H: 1V742CG1CHEM903CBC3.63van der Waals
768-782 H: 1R777NECHEM903O1A3.75H.Bond
768-782 H: 1R777CZCHEM903O1A3.72van der Waals
768-782 H: 1R777NH2CHEM903CGA3.96
768-782 H: 1R777NH2CHEM903O1A2.79H.Bond
786-813 H: 1F801CD2CHEM903CMB3.92van der Waals
786-813 H: 1F801CE2CHEM903CHB3.87van der Waals
786-813 H: 1F801CE2CHEM903C1B3.8van der Waals
786-813 H: 1F801CE2CHEM903C2B3.61van der Waals
786-813 H: 1F801CE2CHEM903CMB3.5van der Waals
786-813 H: 1F801CZCHEM903CHB3.58van der Waals
786-813 H: 1F801CZCHEM903C1B3.99van der Waals
786-813 H: 1F801CZCHEM903CMB3.93van der Waals
786-813 H: 1N804CBCHEM903CBB3.47van der Waals
786-813 H: 1F808CE2CHEM903CAB3.61van der Waals
786-813 H: 1F808CE2CHEM903CBB3.42van der Waals
786-813 H: 1F808CZCHEM903CAB3.74van der Waals
786-813 H: 1F808CZCHEM903CBB3.83van der Waals